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java.lang.Objectjava.lang.Thread
org.agmodel.bioinfo.antmapgui.AntColonyOrdering
A thread class for ordering loci by ACO algorithm
Title: AntMap
Explanation: Linkage mapping software based on ACO algorithm
Copyright: Copyright (c) 2004 NARO
Company name: NARO
Field Summary | |
(package private) AcoParamsBean |
acoParamsBean
|
(package private) GroupExtractor |
groupExtractor
|
(package private) javax.swing.JTextArea |
log
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(package private) DrawMapPanel |
map
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(package private) MapData[] |
mapData
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(package private) OrderingOptionBean |
orderingOptionBean
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(package private) javax.swing.JProgressBar |
progress
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(package private) javax.swing.JTextArea |
result
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(package private) SegDataBean |
segDataBean
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(package private) ThreadIndicator |
threadIndicator
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Fields inherited from class java.lang.Thread |
MAX_PRIORITY, MIN_PRIORITY, NORM_PRIORITY |
Constructor Summary | |
AntColonyOrdering(javax.swing.JTextArea log,
javax.swing.JTextArea result,
DrawMapPanel map,
javax.swing.JProgressBar progress,
MapData[] mapData,
SegDataBean segDataBean,
GroupExtractor groupExtractor,
OrderingOptionBean orderingOptionBean,
AcoParamsBean acoParamsBean,
ThreadIndicator threadIndicator)
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Method Summary | |
void |
run()
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Methods inherited from class java.lang.Thread |
activeCount, checkAccess, countStackFrames, currentThread, destroy, dumpStack, enumerate, getContextClassLoader, getName, getPriority, getThreadGroup, holdsLock, interrupt, interrupted, isAlive, isDaemon, isInterrupted, join, join, join, resume, setContextClassLoader, setDaemon, setName, setPriority, sleep, sleep, start, stop, stop, suspend, toString, yield |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
javax.swing.JTextArea log
javax.swing.JTextArea result
DrawMapPanel map
javax.swing.JProgressBar progress
MapData[] mapData
SegDataBean segDataBean
GroupExtractor groupExtractor
OrderingOptionBean orderingOptionBean
AcoParamsBean acoParamsBean
ThreadIndicator threadIndicator
Constructor Detail |
public AntColonyOrdering(javax.swing.JTextArea log, javax.swing.JTextArea result, DrawMapPanel map, javax.swing.JProgressBar progress, MapData[] mapData, SegDataBean segDataBean, GroupExtractor groupExtractor, OrderingOptionBean orderingOptionBean, AcoParamsBean acoParamsBean, ThreadIndicator threadIndicator)
Method Detail |
public void run()
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