Serialized Form
Package org.agmodel.bioinfo.antmap |
serialVersionUID: 1666077872937285707l
alpha
double alpha
beta
double beta
rho
double rho
q
double q
n_iteration
int n_iteration
n_ant
int n_ant
init_tau
double init_tau
p_fancy
double p_fancy
weight
double weight
serialVersionUID: 1170301808309260031l
method
int method
criterion
int criterion
mapFunction
int mapFunction
threshold
double threshold
minNMarker
int minNMarker
serialVersionUID: 6414497624917059021l
index
int index
Name
java.lang.String Name
location
double location
bootProb
double bootProb
serialVersionUID: -3920222151085042694l
maxIteration
int maxIteration
nConfirm
int nConfirm
mapFunction
int mapFunction
criterion
int criterion
nBootstrap
int nBootstrap
groupIndex
int groupIndex
serialVersionUID: -9011231793710265656l
genotypeData
char[][] genotypeData
segType
int segType
markerName
java.lang.String[] markerName
markerType
int[] markerType
serialVersionUID: -1162032944949595017l
tourLength
double tourLength
tourOrder
int[] tourOrder
Package org.agmodel.bioinfo.antmapgui |
borderLayout1
java.awt.BorderLayout borderLayout1
jPanel1
javax.swing.JPanel jPanel1
jButton1
javax.swing.JButton jButton1
jScrollPane1
javax.swing.JScrollPane jScrollPane1
jTextArea1
javax.swing.JTextArea jTextArea1
acoParamsBean
AcoParamsBean acoParamsBean
dppAlpha
DblParamPanel dppAlpha
dppBeta
DblParamPanel dppBeta
dppRho
DblParamPanel dppRho
dppQ
DblParamPanel dppQ
ippNIteration
IntParamPanel ippNIteration
ippNAnt
IntParamPanel ippNAnt
dppInitTau
DblParamPanel dppInitTau
dppPFancy
DblParamPanel dppPFancy
dppWeight
DblParamPanel dppWeight
gridLayout1
java.awt.GridLayout gridLayout1
jPanel1
javax.swing.JPanel jPanel1
jButtonLoad
javax.swing.JButton jButtonLoad
jButtonSave
javax.swing.JButton jButtonSave
jFileChooser1
javax.swing.JFileChooser jFileChooser1
groupingOptionPanel
GroupingOptionPanel groupingOptionPanel
orderingOptionPanel
OrderingOptionPanel orderingOptionPanel
acoParamsPanel
AcoParamsPanel acoParamsPanel
drawMapOptionPanel
DrawMapOptionPanel drawMapOptionPanel
text
java.lang.String text
jLabel1
javax.swing.JLabel jLabel1
flowLayout1
java.awt.FlowLayout flowLayout1
jComboBox1
javax.swing.JComboBox jComboBox1
range
int range
text
java.lang.String text
value
double value
jLabelText
javax.swing.JLabel jLabelText
jLabelValue
javax.swing.JLabel jLabelValue
jTextField
javax.swing.JTextField jTextField
jButtonAlter
javax.swing.JButton jButtonAlter
drawMapOptionBean
DrawMapOptionBean drawMapOptionBean
gridLayout1
java.awt.GridLayout gridLayout1
rbpBootstrapProb
RadioButtonPanel rbpBootstrapProb
dppScaleFactor
DblParamPanel dppScaleFactor
ippMapSpacing
IntParamPanel ippMapSpacing
ippMarginSize
IntParamPanel ippMarginSize
fcpGroupName
FontChooserPanel fcpGroupName
fcpMarkerInfo
FontChooserPanel fcpMarkerInfo
drawMapOptionBean
DrawMapOptionBean drawMapOptionBean
chromWidth
int chromWidth
tickLength
int tickLength
kinkLength
int kinkLength
spaceLength
int spaceLength
spaceHeight
int spaceHeight
format
java.lang.String format
pWidth
int pWidth
pHeight
int pHeight
bufferedImage
java.awt.image.BufferedImage bufferedImage
gBufferedImage
java.awt.Graphics2D gBufferedImage
applied
boolean applied
defaultFont
java.awt.Font defaultFont
panel1
javax.swing.JPanel panel1
gridLayout1
java.awt.GridLayout gridLayout1
ippFontSize
IntParamPanel ippFontSize
cbpFontName
ComboBoxPanel cbpFontName
cbpFontStyle
ComboBoxPanel cbpFontStyle
jPanel1
javax.swing.JPanel jPanel1
jButton_Applly
javax.swing.JButton jButton_Applly
jButton_Cancel
javax.swing.JButton jButton_Cancel
jPanel2
javax.swing.JPanel jPanel2
jTextArea1
javax.swing.JTextArea jTextArea1
jButton_Preview
javax.swing.JButton jButton_Preview
font
java.awt.Font font
text
java.lang.String text
flowLayout1
java.awt.FlowLayout flowLayout1
jLabel_Text
javax.swing.JLabel jLabel_Text
jLabel_FontInfo
javax.swing.JLabel jLabel_FontInfo
jButton_Setting
javax.swing.JButton jButton_Setting
groupingOptionBean
GroupingOptionBean groupingOptionBean
jPanel2
javax.swing.JPanel jPanel2
jLabel2
javax.swing.JLabel jLabel2
jRadioButtonR
javax.swing.JRadioButton jRadioButtonR
jRadioButtonDist
javax.swing.JRadioButton jRadioButtonDist
jRadioButtonP
javax.swing.JRadioButton jRadioButtonP
jRadioButtonLOD
javax.swing.JRadioButton jRadioButtonLOD
buttonGroup1
javax.swing.ButtonGroup buttonGroup1
gridLayout1
java.awt.GridLayout gridLayout1
dppThreshold
DblParamPanel dppThreshold
ippMinNMarker
IntParamPanel ippMinNMarker
rbpMethod
RadioButtonPanel rbpMethod
rbpMapFunction
RadioButtonPanel rbpMapFunction
range
int range
text
java.lang.String text
value
int value
jLabelText
javax.swing.JLabel jLabelText
jLabelValue
javax.swing.JLabel jLabelValue
jTextField
javax.swing.JTextField jTextField
jButtonAlter
javax.swing.JButton jButtonAlter
SI_LOG
int SI_LOG
- See Also:
- Constant Field Values
SI_DATA
int SI_DATA
- See Also:
- Constant Field Values
SI_RESULT
int SI_RESULT
- See Also:
- Constant Field Values
SI_MAP
int SI_MAP
- See Also:
- Constant Field Values
contentPane
javax.swing.JPanel contentPane
borderLayout1
java.awt.BorderLayout borderLayout1
jMenuBar
javax.swing.JMenuBar jMenuBar
jMenu_File
javax.swing.JMenu jMenu_File
jMenuItem_File_Open
javax.swing.JMenuItem jMenuItem_File_Open
jMenuItem_File_Exit
javax.swing.JMenuItem jMenuItem_File_Exit
jMenu_Save
javax.swing.JMenu jMenu_Save
jMenuItem_Save_Result
javax.swing.JMenuItem jMenuItem_Save_Result
jMenuItem_Save_Log
javax.swing.JMenuItem jMenuItem_Save_Log
jMenu_Anal
javax.swing.JMenu jMenu_Anal
jMenuItem_Anal_Seg
javax.swing.JMenuItem jMenuItem_Anal_Seg
jMenuItem_Anal_Group
javax.swing.JMenuItem jMenuItem_Anal_Group
jMenuItem_Anal_Order
javax.swing.JMenuItem jMenuItem_Anal_Order
jMenuItem_Anal_Boot
javax.swing.JMenuItem jMenuItem_Anal_Boot
jMenuItem_Anal_Full
javax.swing.JMenuItem jMenuItem_Anal_Full
jMenu_Help
javax.swing.JMenu jMenu_Help
jMenuItem_Help_About
javax.swing.JMenuItem jMenuItem_Help_About
jMenuItem_Help_Gpl
javax.swing.JMenuItem jMenuItem_Help_Gpl
jTabbedPane1
javax.swing.JTabbedPane jTabbedPane1
jScrollPane1
javax.swing.JScrollPane jScrollPane1
myTextArea_log
MyTextArea myTextArea_log
jScrollPane2
javax.swing.JScrollPane jScrollPane2
jTextArea_data
javax.swing.JTextArea jTextArea_data
jScrollPane3
javax.swing.JScrollPane jScrollPane3
myTextArea_result
MyTextArea myTextArea_result
jScrollPane4
javax.swing.JScrollPane jScrollPane4
drawMapPanel
DrawMapPanel drawMapPanel
jFileChooser1
javax.swing.JFileChooser jFileChooser1
antMapOptionPanel
AntMapOptionPanel antMapOptionPanel
jSplitPane1
javax.swing.JSplitPane jSplitPane1
jLabel_Status
javax.swing.JLabel jLabel_Status
jProgressBar
javax.swing.JProgressBar jProgressBar
antMapEngine
AntMapEngine antMapEngine
jMenuItem_Anal_Redraw
javax.swing.JMenuItem jMenuItem_Anal_Redraw
jMenuItem_Save_Map
javax.swing.JMenuItem jMenuItem_Save_Map
orderingOptionBean
OrderingOptionBean orderingOptionBean
gridLayout1
java.awt.GridLayout gridLayout1
buttonGroup1
javax.swing.ButtonGroup buttonGroup1
ippNIteration
IntParamPanel ippNIteration
ippNBootstrap
IntParamPanel ippNBootstrap
rbpMapFunction
RadioButtonPanel rbpMapFunction
rbpCriterion
RadioButtonPanel rbpCriterion
cbpTargetedGroup
ComboBoxPanel cbpTargetedGroup
text
java.lang.String text
jLabel1
javax.swing.JLabel jLabel1
buttonGroup
javax.swing.ButtonGroup buttonGroup
buttonList
java.util.ArrayList buttonList
Package org.agmodel.bioinfo.common |
serialVersionUID: -5493080134283787024l
serialVersionUID: -5489997865593004270l
Package org.agmodel.bioinfo.segregation |
serialVersionUID: -8079902472884678348l
serialVersionUID: 1319605142840402266l
value
double value
n
int n
chi2
double chi2
p
double p
lod
double lod
error
boolean error
serialVersionUID: -8588974661439856657l
segType
int segType
markerType
int markerType
n_data
int n_data
n_miss
int n_miss
genotype
char[] genotype
n_obs
int[] n_obs
n_exp
double[] n_exp
chiSqr
double chiSqr
p
double p
Package org.agmodel.bioinfo.stat |
serialVersionUID: 8308633946544548094l
x
int[] x
p
int p
q
int q
r
int r