|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectorg.agmodel.bioinfo.segregation.SegRatioTest
Constructor Summary | |
SegRatioTest()
|
Method Summary | |
SegRatioBean |
test(int segType,
char[] l)
test under normal segregation in segType generation |
SegRatioBean |
testBC(char[] l)
test under normal segregation in BC generation |
SegRatioBean |
testDH(char[] l)
test under normal segregation in DH generation |
SegRatioBean |
testF2(char[] l)
get probability under normal segregation in F2 generation |
SegRatioBean |
testRIL(char[] l)
get probability under normal segregation in RIL infinite generation |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public SegRatioTest()
Method Detail |
public SegRatioBean test(int segType, char[] l)
segType
- segregation typel
- Array of genotypes
public SegRatioBean testBC(char[] l)
l
- Array of genotypes for locus
('A' (homozygote for the recurrent parent genotype),
'H' (heterozogote),
'-' (missing data))
public SegRatioBean testDH(char[] l)
l
- Array of genotypes for locus
('A' (homozygote for parental genotype a),
'B' (homozygote for paretnal genotype b),
'-' (missing data))
public SegRatioBean testRIL(char[] l)
l
- Array of genotypes for locus
('A' (homozygote for parental genotype a),
'B' (homozygote for paretnal genotype b),
'-' (missing data))
public SegRatioBean testF2(char[] l)
l
- Array of genotypes for locus
('A' (homozygote for parental genotype a),
'B' (homozygote for paretnal genotype b),
'H' (heterozygote carrying both alleles a and b),
'C' (not a homozygote for allele a (either bb or ab genotype)),
'D' (not a homozygote for allele b (either aa or ab genotype)),
'-' (missing data))
|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |