org.agmodel.bioinfo.antmap
Class MapData
java.lang.Object
org.agmodel.bioinfo.antmap.MapData
- public class MapData
- extends java.lang.Object
Constructor Summary |
MapData()
|
MapData(int mapFunction)
|
MapData(int[] markerIndex,
int[] bestOrder,
java.lang.String[] name,
double[][] r)
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Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
MapData
public MapData()
MapData
public MapData(int mapFunction)
MapData
public MapData(int[] markerIndex,
int[] bestOrder,
java.lang.String[] name,
double[][] r)
setMarkers
public void setMarkers(int[] markerIndex,
int[] bestOrder,
java.lang.String[] name,
double[][] r)
alignMarkers
public void alignMarkers()
getNMarker
public int getNMarker()
getLength
public double getLength()
getMarker
public MarkerBean getMarker(int i)
getMarkerIndexArray
public int[] getMarkerIndexArray()
getMarkerIndex
public int getMarkerIndex(int i)
getMarkerName
public java.lang.String getMarkerName(int i)
getMarkerLocation
public double getMarkerLocation(int i)
getMarkerBootProb
public double getMarkerBootProb(int i)
setMarkerBootProb
public boolean setMarkerBootProb(int i,
double bootProb)
getMapFunction
public int getMapFunction()
- Returns:
setMapFunction
public void setMapFunction(int i)
show
public void show()
showLocation
public void showLocation()
showBootProb
public void showBootProb()
getName
public java.lang.String getName()
- Returns:
setName
public void setName(java.lang.String string)
- Parameters:
string
-