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java.lang.Objectorg.agmodel.bioinfo.segregation.FisherInfoForRBean
Constructor Summary | |
FisherInfoForRBean()
コンストラクタ |
Method Summary | |
double |
getFisherInfo_BC(double n,
double r)
Calculate Fisher's amount of information in BC generation |
double |
getFisherInfo_DH(double n,
double r)
Calculate Fisher's amount of information in DH generation |
double |
getFisherInfo_F2_CC(double n,
double r)
Calculate Fisher's amount of information between codominant markers in F2 generation |
double |
getFisherInfo_F2_CD(double n,
double r)
Calculate Fisher's amount of information between codominant and domiant markers in F2 generation |
double |
getFisherInfo_F2_DD_Cup(double n,
double r)
Calculate Fisher's amount of information between domiant markers in coupling phase in F2 generation |
double |
getFisherInfo_F2_DD_Rep(double n,
double r)
Calculate Fisher's amount of information between domiant markers in repulsion phase in F2 generation |
double |
getFisherInfo_RIL(double n,
double r)
Calculate Fisher's amount of information in RIL generation |
double |
getStd_BC(double n,
double r)
Calculate standard deviation of recombination rate in BC generation |
double |
getStd_DH(double n,
double r)
Calculate standard deviation of recombination rate in DH generation |
double |
getStd_F2_CC(double n,
double r)
Calculate standard deviation of recombination rate between codomiannt markers in F2 generation |
double |
getStd_F2_CD(double n,
double r)
Calculate standard deviation of recombination rate between codominant and dominant markers in F2 generation |
double |
getStd_F2_DD_Cup(double n,
double r)
Calculate standard deviation of recombination rate between dominant markers in couplihng phase in F2 generation |
double |
getStd_F2_DD_Rep(double n,
double r)
Calculate standard deviation of recombination rate between dominant markers in repulsion phase in F2 generation |
double |
getStd_RIL(double n,
double r)
Calculate standard deviation of recombination rate in RIL generation |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public FisherInfoForRBean()
Method Detail |
public double getFisherInfo_F2_CC(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_F2_CC(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_F2_CD(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_F2_CD(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_F2_DD_Cup(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_F2_DD_Cup(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_F2_DD_Rep(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_F2_DD_Rep(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_BC(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_BC(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_DH(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_DH(double n, double r)
n
- # of individualsr
- Recombination rate
public double getFisherInfo_RIL(double n, double r)
n
- # of individualsr
- Recombination rate
public double getStd_RIL(double n, double r)
n
- # of individualsr
- Recombination rate
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