Hirohisa Kishino,
Ph.D.
Professor of Statistics
Laboratory of Biometry and
Bioinformatics
Graduate
Yayoi
Email: kishino@lbm.ab.a.u-tokyo.ac.jp
Research Interests
Currently,
I am interested in development of hierarchical models to understand genomic
evolution and population structure, and to map genes with high resolution. I
realize the weight of the analysis is going to shift from data analysis toward
database analysis. It would be so nice to detect footprints and estimate the
probabilistic structure of biological diversification and history of adaptation
from genomic records. I also realize that life is unpredictable. I appreciate
all of the different research environments at Institute of Statistical Mathematics,
Ocean Research Institute
(Univ. Tokyo), Department of Advanced Social and
International Studies (Univ. Tokyo), and Department of
Agricultural and Environmental Biology (Univ. Tokyo), where I had valuable
experiences. As a result, I have walked around multiple research fields: molecular evolution and population genetics, ecological researches and fisheries sciences, social research and psychology, sports sciences,
derivatives, etc. To achieve interdisciplinary study, I make much of
collaboration with researchers in the related fields. Among them, I heavily
appreciate Jeffrey L.
Thorne, Joseph
Felsenstein, Masami Hasegawa,
and Shuichi
Kitada, who introduced me to attractive areas.
Papers in molecular evolution and
population genetics
Papers with "*" are in Japanese.
Mollah,M. M. H., Mollah,
M. N. H., and Kishino, H. (2012). β-empirical Bayes inference and model
diagnosis of microarray data. BMC Bioinformatics. accepted.
Nishiyama, T., Kishino,
H., Suzuki, S., Ando, R., Niimura, H., Uemura, H., Horita, M., Ohnaka, K., Kuriyama, N., Mastuo, K., Guang, Y., Wakai, K., Hamajima, N., and
Tanaka, H. (2012). Detailed analysis of Japanese population
substructure with a focus on the Southwest Islands of Japan. PLoS ONE. accepted.
Mariadassou, M., Bar-Hen,
A., and Kishino, H. (2012). Taxon Influence Index:
assessing taxon-induced incongruities in phylogenetic inference.
Systematic Biology. 61: 337–345.
Guo, Y., Shen,
Y-H., Sun, W., Kishino, H.,
Xiang, Z-H., and Zhang, Z. (2011). Nucleotide diversity and
selection signature in the domesticated silkworm, Bombyx mori, and wild silkworm, Bombyx mandarina.
Journal of Insect Science. 11:
119.
Kitazoe, Y., Kishino, H., Hasegawa, M., Matsui, A., Lane, N., and
Tanaka, M. (2011).
Stability of mitochondrial membrane proteins in terrestrial vertebrates
predicts aerobic capacity and longevity. Genome
Biology and Evolution. 3: 1233-1244.
Nishiyama, T., Takahashi, K., Tango, T.,
Pinto, D., Scherer, S. W., Takami, S., and Kishino, H. (2011). A scan statistic to extract causal gene
clusters from case-control genome-wide rare CNV data. BMC Bioinformatics. 12: 205.
Watabe, T. and Kishino,
H. (2010). Structural considerations in the fitness landscape
of a virus. Molecular Biology and Evolution.
27: 1782-1791.
Koyano, H. and Kishino,
H. (2010). Quantifying biodiversity
and asymptotics for a sequence of random strings. Physical Review E. 81: 061912 (selected
for the June 15, 2010 issue of Virtual Journal of Biological Physics Research).
Tanabe, K., Mita,
T., Jombart, T., Eriksson, A., Palacpac,
N., Ranford-Cartwright, L., Sawai, H., Sakihama, N., Horibe, S., Ohmae, H., Nakamura, M., Ferreira, M. U., Escalante, A. A.,
Prugnolle, F., Björkman,
A., Färnert, A., Akira Kaneko, A., Horii, T., Manica,
A., Kishino, H., and Balloux,
F. (2010). Plasmodium falciparum accompanied the human expansion out of Africa.
Current Biology. 20: 1283-1289.
Sawai, H., Otani,
H., Arisue, N., Palacpac, N., de
Oliveira Martins, L., Pathirana, S., Handunnetti, S., Kawai,
S., Kishino, H., Horii, T., and Tanabe, K.
(2010). Lineage-specific positive selection at the merozoite
surface protein 1 (msp1) locus of Plasmodium vivax
and related simian malaria parasites. BMC
Evolutionary Biology. 10: 52.
Miyashita, S. and Kishino, H. (2010). Estimation of the size of genetic bottlenecks in cell-to-cell movement of
Soil-borne
wheat mosaic virus (SBWMV) and the possible role of the bottlenecks in
speeding up selection on variation in trans-acting
genes or elements. Journal of Virology.
84: 1828-1837.
de Oliveira Martins, L. and Kishino, H. (2010). Distribution of distances
between topologies and its effect on detection of phylogenetic recombination. Annals of the Institute of Statistical Mathematics. 62: 145-159.
Nishiyama, T., Notohara, M., Sumi, S., Takami, S., and Kishino, H.
(2009). Major contribution of dominant inheritance to autism spectrum
disorder (ASD) in populationbased families. Journal of Human Genetics. 54: 721-726.
Li,
Z-W., Li, X., Yu, Q-Y., Xiang, Z-H., Kishino, H., and Zhang, Z. (2009). The
small heat shock protein (sHSP) genes in the
silkworm, Bombyx mori,
and comparative analysis with other insect sHSP
genes. BMC Evolutionary Biology. 9: 215.
Seo, T.-K. and Kishino, H. (2009). Statistical comparison of nucleotide-, amino-acid-, and codon-substitution models for the
evolutionary analysis of protein-coding sequences. Systematic
Biology. 58:
199-210.
Choi, S. C., Stone, E. A., Kishino, H., and Thorne, J. L. (2009). Estimates of natural
selection due to protein tertiary structure inform the ancestry of biallelic loci. Gene.
441: 45-52.
Kitada, S., Shishidou, H., Sugaya, T., Kitakado, T., Hamasaki, K., and Kishino, H.
(2009). Genetic effects of long-term stock enhancement programs. Aquaculture. 290: 69-79.
Kitazoe, Y., Kishino, H., Hasegawa, M.,
Nakajima, N., Thorne, J. L., and Tanaka, M. (2008). Adaptive threonine
increase in transmembrane regions of mitochondrial
proteins in higher primates. PLoS ONE. 3
(10): e3343.
O’Loughlin, S.
M., Okabayashi, T., Honda, M., Kitazoe,
Y., Kishino, H., Somboon,
P., Sochantha, T., Nambanya,
S., Saikia, P. K., Dev, V.,
and Walton, C. (2008).
Complex
population history of two forest-dependent Anopheles dirus mosquito species in Southeast Asia suggests
the influence of Pleistocene climate change. Journal of Evolutionary Biology. 21: 1555-1569.
Kawaoka. S.,
Hayashi, N., Katsuma, S., Kishino,
H., Kohara, Y., Mita, K.,
and Shimada, T. (2008). Bombyx small RNAs: Genomic
defense system against transposons in the silkworm, Bombyx
mori. Insect Biochem. Mol. Biol. 38:
1058-1065.
de
Oliveira Martins, L., Leal, É. and Kishino, H. (2008). Phylogenetic detection of recombination with a
Bayesian prior on the distance between trees. PLoS ONE. 3 (7): e2651.
Seo, T.-K.
and Kishino, H. (2008). Synonymous substitutions
substantially improve evolutionary inference from highly diverged proteins. Systematic Biology. 57:
367-377.
Kitada, S., Kitakado,
T., and Kishino, H. (2007). Empirical Bayes
inference of pairwise FST and its distribution in the genome. Genetics.
177: 861-873.
Tanabe,
K., Escalante, A., Sakihama, N., Honda, M., Arisue, N., Horii, T., Culleton,
R., Hayakawa, T., Hashimoto, T., Longacre, S., Pathirana, S., Handunnetti, S.,
and Kishino, H. (2007). Recent
independent evolution of msp1 polymorphism in Plasmodium vivax
and related simian malaria parasites. Molecular
& Biochemical Parasitology. 156: 74-79.
Choi, S. C., Hobolth, A., Robinson, D. M., Kishino,
H., and Thorne, J. L. (2007). Quantifying the impact of protein tertiary
structure on molecular evolution. Molecular Biology and Evolution. 24: 1769-1782.
Thorne, J. L., Choi, S.
C., Yu, J., Higgs, P. G., and Kishino, H. (2007). Population genetics without intraspecific data. Molecular
Biology and Evolution. 24: 1667-1677.
Watabe,T.,
Kishino, H., Martins, L. O., and Kitazoe,
Y. (2007). A likelihood-based index of protein-protein binding affinities with
application to influenza HA escape from antibodies. Molecular Biology and
Evolution. 24: 1627-1638.
Kitazoe, Y., Kishino,
H., Waddell, P. J., Nakajima, N., Okabayashi, T., Watabe, T., and Okuhara, Y.
(2007). Robust
time estimation reconciles views of the antiquity of placental mammals. PLoS ONE. 1 (4): e384.
Waddell, P. J., Kishino, H., and Ota, R. (2007). Phylogenetic
methodology for detecting protein interactions. Molecular Biology and
Evolution. 24: 650-659.
Kitakado, T., Kitada,
S., Obata, Y., and Kishino, H. (2006). Simultaneous estimation of mixing
rates and genetic drift under successive sampling of genetic markers with
application to the mud crab (Scylla paramamosain)
in Japan. Genetics. 173: 2063-2072.
Kitakado, T., Kitada,
S., Kishino, H., and Skaug,
H. J. (2006). An integrated likelihood method for estimating genetic
differentiation between populations. Genetics. 173:
2073-2082.
Okabayashi, T., Kitazoe,
Y., Kishino, H., Watabe,
T., Nakajima, N., Okuhara, Y., O'Loughlin,
S., and Walton, C. (2006). Core set approach to reduce uncertainty of gene
trees. BMC Evolutionary Biology. 6: 41.
Watabe, T., Kishino,
H., Okuhara,Y. and Kitazoe, Y. (2006). Fold recognition of the HIV-1 V3 loop
and flexibility of its crown structure during the course of adaptation to a
host. Genetics. 172: 1385-1396.
Seo, T.-K., Kishino, H., and Thorne, J. L. (2005). Incorporating
gene-specific variation when inferring and evaluating optimal evolutionary tree
topologies from multilocus sequence data. Proceedings of National Academy of Sciences, USA. 102: 4436-4441.
Kitazoe, Y., Kishino,
H., Okabayashi, T., Watabe,
T., Nakajima, N., Okuhara, Y., and Kurihara, Y. (2005). Multidimensional vector space representation
for correlated evolution and molecular phylogeny. Molecular Biology
and Evolution. 22: 704-715.
Zhang, Z., Luo, Z., Kishino, H., and Kearsey, M. J. (2005). Divergence pattern of duplicate
genes in protein-protein interactions follows the power law. Molecular
Biology and Evolution. 22: 501-505.
Kitada, S. and Kishino,
H. (2004). Simultaneous detection of linkage disequilibrium and genetic
differentiation of subdivided populations. Genetics. 167:
2003-2013.
Zhang, Z. and Kishino, H. (2004). Genomic background predicts the fate of
duplicated genes:evidence
from the yeast genome. Genetics. 166:
1995-1999.
Seo, T.-K., Kishino, H., and Thorne, J. L. (2004). Estimating absolute
rates of synonymous and nonsynonymous nucleotide
substitution in order to characterize natural selection and date species
divergences. Molecular Biology and Evolution. 21:
1201-1213.
Zhang, Z. and Kishino, H. (2004). Genomic background drives the
divergence at synonymous sites of duplicate amylase genes in Drosophila.
Molecular Biology and Evolution. 21 222-227.
Wiegmann, B. M., Yeates,
D. K., Thorne, J. L., and Kishino, H. (2003). Time
flies, a new molecular time-scale for brachyceran fly
evolution without a clock. Systematic Biology. 52:
745-756.
Chujo, A., Zhang, Z., Kishino, H., Shimamoto, K., and Kyozuka, J. (2003). Partial conservation
of LFY function between rice and Arabidopsis. Plant
Cell Physiology. 44: 1311-1319.
Hasegawa,
M., Thorne, J. L., and Kishino, H. (2003). Time scale of eutherian
evolution estimated without assuming a constant rate of molecular evolution. Genes & Genetic Systems. 78:
267-283.
Zhang, Z., Inomata, N.,
Yamazaki, Y., and Kishino, H. (2003). Evolutionary history and mode of the amylase multigene family in Drosophila. Journal of Molecular Evolution. 57:
702-709.
Robinson,
D. M., Jones, D. T., Kishino, H., Goldman, N., and
Thorne, J. L. (2003).
Protein evolution with dependence among codons due to
tertiary structure. Molecular Biology and Evolution. 20: 1692-1704.
Waddell, P. J., Kishino, H., and Ota, R. (2002). Very fast algorithms for
evaluating the stability of ML and Bayesian phylogenetic trees. Genome Informatics Series. 13:
82-92.
Thorne, J. L. and Kishino, H. (2002). Divergence time and
evolutionary rate estimation with multilocus data.
Systematic Biology. 51: 689-702.
Seo, T.-K.,
Thorne, J. L., Hasegawa, M., and Kishino, H. (2002).
Estimation of effective population size of HIV-1 within a host: A
pseudo-maximum likelihood approach. Genetics. 160:
1283-1293.
Seo, T.-K.,
Thorne, J. L., Hasegawa, M., and Kishino, H. (2002). A viral sampling design for testing the molecular clock and for
estimating evolutionary rates and divergence times. Bioinformatics.
18: 115-123.
Waddell, P. J. and Kishino, H., and Ota, R. (2001). A
phylogenetic foundation for comparative mammalian genomics. Genome Informatics Series. 12:
141-155.
Nakamichi, R., Ukai,
Y., and Kishino, H. (2001). Resolving of closely
linked quantitative trait loci with a genetic algorithm. Genetics. 158: 463-475.
Kishino, H., Thorne, J. L., and Bruno, W.
J. (2001). Performance of a divergence time estimation method
under a probabilistic model of rate evolution. Molecular Biology and
Evolution. 18: 352-361.
Kishino, H. and Waddell, P. J. (2000). Correspondence analysis of genes and tissue types and finding
genetic links from microarray data. Genome
Informatics Series. 11: 83-95.
Waddell, P. J. and Kishino, H. (2000). Cluster inference methods and graphical
models evaluated on NCI60 microarray gene expression data. Genome
Informatics Series. 11: 129-140.
Waddell, P. J., Kishino, H., and Ota, R. (2000). Rapid
evaluation of the phylogenetic congruence of sequence data using likelihood
ratio tests. Molecular Biology and Evolution. 17:
1988-1992.
Kitada, S., Hayashi, T. and Kishino, H. (2000). Empirical Bayes procedure for estimating
genetic distance between populations and effective population size. Genetics.
156: 2063-2079.
Bar-Hen,
A. and Kishino, H. (2000). Comparing the likelihood functions
of phylogenetic trees. Annals of the Institute of
Statistical Mathematics. 52: 43-56.
Ota, R.,
Waddell, P. J., Hasegawa, M., Shimodaira, H. and Kishino, H. (2000). Appropriate
likelihood ratio tests and marginal distributions for evolutionary tree models
with constraints on parameters. Molecular Biology and Evolution. 17:
798-803.
Kishino, H., Thorne, J. L. and Bar-Hen, A.
(1999). Statistical models of molecular evolution and their
comparison. 1998 Proceedings of the Business and Economic Statistical
Section, American Statistical Association.: 21-30.
Pastene, L. A., Gotoh,
M. and Kishino, H. (1999). An estimate of mixing
proportion of `J' and `O' stocks minke whales in
sub-area 11 based on mitochondrial DNA haplotype data. Report of the
International Whaling Commission, 48: 471-474.
Thorne, J. L., Kishino, H. and Painter, I. S. (1998). Estimating the rate
of evolution of the rate of molecular evolution. Molecular Biology and
Evolution. 15: 1647-1657.
Kishino, H. (1996)*. Estimation of mixing proportions
using genetic markers. Ocean, 28(10): 601-606.
Chow, S. and Kishino, H. (1996). Phylogenetic relationships between tuna
species of genus Thunnus (Scombridae:
Teleostei): Inconsistent implications from
morphology, nuclear and mitochondrial genomes. Journal of Molecular
Evolution, 41: 741-748.
Punt, A.
E., Butterworth, D. S., Wada, S. and Kishino, H.
(1995). On the use of allele frequency data to provide estimates of the
mixing between the various North Pacific minke whale
stocks. Report of the International Whaling Commission, 45:
293-302.
Matsuishi, T., Kishino,
H. and Numachi, K. (1995)*. Mathematical
models on genee replacement through stock
enhancement.
Kishino, H., Kitada,
S. and Hiramatsu, K. (1994)*. Sampling
scheme for the estimation of the stock composition in the mixed population
based on genetic data.
Hasegawa, M and Kishino, H. (1994). Acuracies of the simple methods for estimating the bootstrap probability of
a maximum-likelihood tree. Molecular Biology and Evolution, 11:
142-145.
Felsenstein, J. and Kishino,
H. (1993). Is there something wrong with the bootstrap on phylogenies? A reply to Hillis and Bull. Systematic
Biology, 42(2): 193-200.
Thorne, J. L. and Kishino, H. (1992). Freeing phylogenies from artifacts of
alignment. Molecular Biology and Evolution, 9: 1148-1162.
Thorne, J. L., Kishino, H. and Felsenstein, J.
(1992). Inching toward reality: an improved likelihood model of sequence
evolution. Journal of Molecular Evolution, 34: 3-16.
Thorne, J. L., Kishino, H. and Felsenstein, J.
(1991). An evolutionary model for maximum likelihood
alignment of DNA sequences. Journal of Molecular Evolution, 33:
114-124.
Hasegawa,
M., Kishino, H. and Saitou, N. (1991). On the maximum
likelihood method in molecular phylogenetics. Journal
of Molecular Evolution, 32: 443-445.
Iwabe,
N., Kishino, H., Hasegawa, M. and Miyata, T. (1991). Evolution of RNA
polymerases and branching patterns of the three major groups of archaebacteria. Journal of Molecular Evolution,
32: 70-78.
Iwabe, N., Kuma, K.-I., Kishino,
H., Hasegawa, M. and Miyata, T. (1990). Compartmentalized isozyme
genes and the origin of introns. Journal of Molecular Evolution, 31:
205-210.
Kishino, H., Miyata, T. and Hasegawa, M.
(1990). Maximum likelihood inference of protein phylogeny and
the origin of chloroplasts. Journal of Molecular Evolution, 31:
151-160.
Hasegawa, M., Kishino, H., Hayasaka, K. and Horai, S. (1990). Mitochondrial DNA evolution in primates:
Transition rate has been extremely low in the Lemur. Journal of Molecular
Evolution, 31: 113-121.
Kishino, H. and Hasegawa, M. (1990).
Converting distance to time: Application to human evolution. In Methods in
Enzymology 183 (Doolittle R. F. ed.): 550-570.
Kishino, H. and Hasegawa, M. (1989). Evaluation of the maximum likelihood estimate of the evolutionary
tree topologies from DNA sequence data. Journal of Molecular Evolution,
29: 170-179.
Hasegawa, M. and Kishino, H. (1989). Confidence limits on the maximum
likelihood estimate of the hominoid tree from mitochondrial DNA sequences. Evolution,
43: 672-677.
Hasegawa, M. Kishino, H. and Yano, T. (1987). Man's place in Hominoidea as inferred from molecular clocks of DNA. Journal
of Molecular Evolution, 26: 132-147.
Hasegawa,
M., Kishino, H. and Yano, T. (1985). Dating of the human-ape splitting
by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution,
22: 160-174.
Hasegawa,
M., Kishino, H. and Yano, T. (1984). A new molecular
clock of mitochondrial DNA and the evolution of Hominoids. Proceedings
of the
Papers in ecological research and
fisheries sciences
Papers with "*" are in Japanese.
Kitada, S., Kishino,
H., and Hamasaki, K. (2011). Bias and significance of relative
reproductive success estimates based on steelhead data: A Bayesian
meta-analysis. Canadian
Journal of Fisheries and Aquatic Sciences. 68: 1827-1835.
Kitada, S., Kitakado,
T., and Kishino, H. (2007)*. Sampling survey
and statistical genetics in fishery resource management and conservation.
Japanese Journal of
Biometrics. 28: S35-S55.
Kitada, S. and Kishino,
H. (2006). Lessons learned from Japanese marine finfish stock enhancement programmes. Fisheries
Research. 80:
101-112.
Saldamando C. I., Miyaguchi,
S., Tatsuta, H., Kishino, H., Bridle, J. R., and R.
K. Butlin. (2005). Inheritance of
song and stridulatory peg number divergence between Chorthippus brunneus and C. jacobsi,
two naturally hybridising grasshopper species (Orthoptera: Acrididae).
Journal of Evolutionary
Biology. 18:
703-712.
Ohizumi, H., Matsuishi,
T., and Kishino, H. (2002). Winter sightings
of humpback and Bryde's whales in tropical waters of
western and central North Pacific. Aquatic
Mammals. 28:
73-77.
Best, P.
and Kishino, H. (1998). Estimating natural mortality rate
in female southern right whales Eubalaena australis. Marine Mammal Science.
14: 738-749.
Yoshida, H., Shirakihara, K., Kishino, H. and Takemura, A. (1998). Finless porpoise abundance in
Yoshida, H., Shirakihara, K., Kishino, H. and Shirakihara, M. (1997). A population size
estimate of the finless porpoise, Neophocaena
phocaenoides, from aerial sighting surveys in Ariake Sound and
Matsuishi, T., Kishino,
H. and Kanno, Y. (1996)*. An estimation procedure of growth
curve from annual rings with unrecognized missing.
Kishino, H. (1994)*. Estimation of stock abundance of
southern bluefin tuna by aerial line transect survey. Research in Fisheries Oceanography58(4): 261-269.
Kitada, S. Hiramatsu,
K. and Kishino, H. (1994). Estimating mortality rates from
tag recoveries: incorporating overdispersion,
correlation and change-points. ICES J. Marine Science, 51:
241-251.
Kitada, S., Hiramatsu,
K. and Kishino, H. (1993)*. Estimation of fish mortality rates
from tag recoveries using partial likelihood.
Matsuishi, T., Wada, T., Matsumiya,
Y. and Kishino, H. (1993). Optimal school
selection and abundance index in purse seine fishery.
Kitada, S., Taga, Y. and Kishino, H. (1992). Effectiveness of
a stock enhancement program evaluated by a two-stage sampling survey of
commercial landings.
Canadian Journal of Fisheries and Aquatic Sciences, 49:
1573-1582.
Kitada, S., Kishino,
H., and Hiramatsu, K. (1993)*. Estimation of mortality rates from
tag recoveries by survey sampling.
Kato, H., Fujise, Y. and Kishino, H.
(1991). Age structure and segregation of southern minke
whales by the data obtained during Japanese research take in 1988/89. Report
of the International Whaling Commission, 41: 287-292.
Kasamatsu, F., Kishino,
H. and Taga, Y. (1991). Estimation of southern minke whale abundance and school size composition based on
1988/89 Japanese feasibility study data. Report of the International Whaling
Commission, 41: 293-302.
Kishino, H., Kato, H., Kasamatsu,
F. and Fujise, Y. (1991). Detection of heterogeneity
and estimation of population characteristics from the field survey data:
1987/88 Japanese feasibility study of southern hemisphere minke
whales. Annals of the Institute of Statistical Mathematics, 43:
435-453.
Kasamatsu, F., Kishino,
H. and Hiroyama, H. (1990). Estimation of the number of minke whale (Balaenoptera
acutorostrata) schools and individuals based on the 1987/88 Japanese feasibility study data. Report of
the International Whaling Commission, 40: 239-247.
Kato, H., Kishino, H. and Fujise, Y.
(1990). Some analyses on age composition and segregation of southern minke whales using samples obtained from the Japanese
feasibility study in 1987/88. Report of the International Whaling Commission,
40: 249-256.
Kishino, H. and Kasamatsu,
F. (1987). Comparison of the closing and passing mode
procedures used in sighting surveys. Report of the International
Whaling Commission, 37: 253-258.
Kishino, H. (1986). On parallel ship
experiments and the line transect method. Report of the International
Whaling Commission, 36: 491-495.
Papers in social research and
psychology
Papers with "*" are in Japanese.
Tan, S.-K., Takano, Y. and Kishino, H. (2001)*. Diversified preference and Bayesian hierarchical model. Japanese Journal of Biometrics. 21: 15-28.
Takahashi, M. and Kishino, H. (2001)*. Memorized life events and their replacement: from a survey of life events. Sociological Theory and Methods. 16: 47-60.
Hanyu, K., Kishino, H., Yamashita, H. and Hayashi, C. (2000). Paper recycling and purchasing: a case of toilet paper in Japan Resources, Conservation and Recycling. 30: 177-199.
Tan, S.-K., Takano, Y. and Kishino, H. (2000)*. Efficiency of the method of four-fold choice in incomplete preference trials. Japanese Journal of Biometrics. 20: 167-179.
Sugisawa H., Kishino, H., Sugihara, Y. and Shibata, H. (2000)*. Characteristics of dropouts and participants in a twelve-year longitudinal research of Japanese elderly. Japanese Journal of Public Health. 47: 337-349.
Yamashita,H., Kishino, H., Hanyu, K., Hayashi, C. and Abe, K. (2000). Circulation indices: New tools for analyzing the structure of material cascades. Resources, Conservation and Recycling. 28: 85-104.
Sugisawa H., Kishino, H., Sugihara, Y. and Shibata, H. (1999)*. Analysis of items missing in responses to a series of follow-up surveys in Japanese elderly. Japanese Journal of Public Health. 46: 1048-1059.
Sugisawa H., Kishino, H., Sugihara, Y., Okabayashi, H. and Shibata, H. (1999)*. Comparison of characteristics between respondents and nonrespondents in a national survey of Japanese elderly using six year follow-up study. Japanese Journal of Public Health. 46: 551-562.
Kishino, H., Hanyu,
K., Yamashita, M. and Hayashi, C. (1999). Recycling and consumption in
Shinkai, Y., Oguchi,
T. and Kishino, H. (1998)*. On the
continuity from the original MMPI and MMPI-2. Journal of Medical
Science,
Kishino, H., Hanyu,
K., Yamashita, H. and Hayashi, C. (1998). Correspondence analysis of paper
recycling society: Consumers and paper makers in
Kishino, H. (1997)*. Questionnaire
for fisheries. Ocean. 29(9): 515-519.
Kishino, H. (ed)
(1995)*. Future Direction of Fisjeries
Households. Tokyo Suisan Shinko-kai.
etc
Statistical methodology
Papers with "*" are in Japanese.
Koyano, H. and Kishino,
H. (2009). Observation subarea decision and population
density estimation by space scale-invariance. J. Japanese
Statistical Society. 39:
77-88.
Kishino,
H. and Bar-Hen, A. (1998). Maximum likelihood procedure adapted to sampling
schemes. Journal of Statistical Planning and Inference.
70: 277-286.
Kishino,
H., Kasamatsu, F. and Toda, T. (1988). On double line
transect method. Report of the International Whaling Commission, 38:
273-279.
Kishino,
H. (1987). Variance of sightings in the survey of patchily
distributed objects. Annals of the Institute of Statistical
Mathematics, 39: 275-287.
Kishino, H., Itoh, M., Noda, K. and Kashiwagi, N. (1985)*.
Drift and difusion by fluctuation
media. Bulletin of the Institute of Statistical Mathematics, 33(1):
83-96.
Kishino,
H. (1983). On the separation principle of stochastic control.
Journal of the Faculty of Science. The
Kishino,
H. (1983). The least square estimation of the transition
probabilities of binary processes on the basis of sample paths. Annals
of the Institute of Statistical Mathematics, 35: 425-438.
Kishino, H. (1981)*. Constructing sociogram
based on dependency with application to international trade data. Bulletin of the Institute of Statistical Mathematics, 29(1):
37-43.
Books and book chapters
"*"
are books in Japanese.
Kishino, H. (2006)*. How to
Interpret Genome Evolution. Iwanami Publisher.
Thorne, J. L. and Kishino, H. (2005). Estimation of
divergence times from molecular sequence data. in:
"Statistical Methods In Molecular Evolution" (Nielsen, R. ed.)
Springer-Verlag.
Kishino, H. and Asai,
K. (2003)*. Statistics for Biological Sequences. Iwanami
Publisher.
Kishino, H. (2001)*. Analyzing Real Data: Survey and
Modeling in Statistical Science (enlarged edition). Nihon-Hyoron Publisher.
Hanyu, K. and Kishino,
H. (2001)*. Measuring
Complex Society: Survey of Paper Recycling Society. Asakura
Publisher.
Kishino, H. (1999)*. Analyzing Real Data: Survey and
Modeling in Statistical Science. Nihon-Hyoron
Publisher.
Hasegawa,
M. and Kishino, H. (1996)*. Molecular Phylogenetics.
Iwanami Publisher.
Miura, R. and Kishino, H. (1994). Pricing of bonds and their derivatives
with multi-factor stochastic interest rates: A note. In Nonlinear and Convex
Analysis in Economic Theory, (ed. Maruyama, T. and Takahashi, W.), Lecture
Notes in Economics and Mathematical Systems, 419, Springer-Verlag: 215-229.
Kishino, H. (1992)*. Statistics
for Social Phenomena. Asakura Publisher.
etc